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Data Munging for Non-Programming Biologists

Oct 20, 2005 by Amir Karger and Eitan Rubin

science
bioinformatics
bioperl
data-munging
biology
scriptome

Have you ever renamed 768 files? Merged the content from 96 files into a spreadsheet? Filtered 100 lines out of a 20,000-line file? Have you ever done these things by hand? Disciples of laziness-one of the three Perl programmer’s…

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Data Munging with Sprog

Jun 23, 2005 by Grant McLean

graphics
data-munging
perl-for-non-programmers
sprog
visual-programming

We’ve all been there-a data translation problem rears its head and you reach for your toolkit of Perl snippets. It might involve parsing a CSV file, extracting MIME attachments, generating bulk SQL insert statements, or scraping data from a…

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